Volume 6 Supplement 2

Proceedings of the 23rd International Conference on Genome Informatics (GIW 2012)

Proceedings

Edited by Jung-Hsien Chiang, Tien-Hao Chang and Hung-Yu Kao

This supplement has not been supported by sponsorship or other external funding.

23rd International Conference on Genome Informatics (GIW 2012). Go to conference site.

Tainan, Taiwan

12-14 December 2012

  1. Proceedings

    Embracing noise to improve cross-batch prediction accuracy

    One important application of microarray in clinical settings is for constructing a diagnosis or prognosis model. Batch effects are a well-known obstacle in this type of applications. Recently, a prominent stud...

    Chuan Hock Koh and Limsoon Wong

    BMC Systems Biology 2012 6(Suppl 2):S3

    Published on: 12 December 2012

  2. Proceedings

    PCDq: human protein complex database with quality index which summarizes different levels of evidences of protein complexes predicted from H-Invitational protein-protein interactions integrative dataset

    Proteins interact with other proteins or biomolecules in complexes to perform cellular functions. Existing protein-protein interaction (PPI) databases and protein complex databases for human proteins are not o...

    Shingo Kikugawa, Kensaku Nishikata, Katsuhiko Murakami, Yoshiharu Sato, Mami Suzuki, Md Altaf-Ul-Amin, Shigehiko Kanaya and Tadashi Imanishi

    BMC Systems Biology 2012 6(Suppl 2):S7

    Published on: 12 December 2012

  3. Proceedings

    A fast and accurate algorithm for single individual haplotyping

    Due to the difficulty in separating two (paternal and maternal) copies of a chromosome, most published human genome sequences only provide genotype information, i.e., the mixed information of the underlying two h...

    Minzhu Xie, Jianxin Wang and Tao Jiang

    BMC Systems Biology 2012 6(Suppl 2):S8

    Published on: 12 December 2012

  4. Proceedings

    Palindromic sequence impedes sequencing-by-ligation mechanism

    Current next-generation sequencing (NGS) platforms adopt two types of sequencing mechanisms: by synthesis or by ligation. The former is employed by 454 and Solexa systems, while the latter by SOLiD system. Alt...

    Yu-Feng Huang, Sheng-Chung Chen, Yih-Shien Chiang, Tzu-Han Chen and Kuo-Ping Chiu

    BMC Systems Biology 2012 6(Suppl 2):S10

    Published on: 12 December 2012

  5. Proceedings

    Computational gene network analysis reveals TNF-induced angiogenesis

    TNF (Tumor Necrosis Factor-α) induces HUVEC (Human Umbilical Vein Endothelial Cells) to proliferate and form new blood vessels. This TNF-induced angiogenesis plays a key role in cancer and rheumatic disease. H...

    Kentaro Ogami, Rui Yamaguchi, Seiya Imoto, Yoshinori Tamada, Hiromitsu Araki, Cristin Print and Satoru Miyano

    BMC Systems Biology 2012 6(Suppl 2):S12

    Published on: 12 December 2012