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Table 1 Abbreviations of the molecular species in the MAPK network.

From: Optimal enumeration of state space of finitely buffered stochastic molecular networks and exact computation of steady state landscape probability

Num.

Abbrev.

Description

1

M

ERK, extracellular signal- regulated kinase

2

MpY

ERK with Y phosphorylated

3

MpT

ERK with T phosphorylated

4

Mpp

ERK with dual phosphorylated

5

MEK

ERK kinase

6

MKP3

ERK phosphatase

7

MpY_MEK

Binding of MpY and MEK

8

MpT_MEK

Binding of MpT and MEK

9

M_MEK _Y

Binding of M and MEK at Y site

10

M_MEK_T

Binding of M and MEK at T site

11

Mpp_MKP3

Binding of Mpp and MKP3

12

MpY_MKP3

Binding of MpY and MKP3

13

MpT_MKP3_Y

Binding of MpT and MKP3 at Y

14

MpT_MKP3_T

Binding of MpT and MKP3 at T

15

M_MKP3_T

Binding of M and MKP3 at T site

16

M_MKP3_Y

Binding of M and MKP3 at Y site