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Table 1 Number and percent of (a) L/C regulated genes in WT or (b) L/C misregulated genes in cli186 and (c) the comparison of genes misregulated in cli186 with their regulation in WT in any one or combination of treatments.

From: An integrated genetic, genomic and systems approach defines gene networks regulated by the interaction of light and carbon signaling pathways in Arabidopsis

a

Treatment

WT L/C Regulation

b

Treatment

cli186 L/C Misregulation

Ā 

L

LC

C

#

%

Ā 

L

LC

C

#

%

1)

L

-

-

2

0.2

1)

L

-

-

31

14.0

2)

-

-

C

1

0.1

2)

-

-

C

36

17.0

3)

-

LC

-

22

2.3

3)

-

LC

-

91

42.0

4)

L

-

C

21

2.2

4)

L

-

C

3

1.4

5)

L

LC

-

4

0.4

5)

L

LC

-

41

19.0

6)

-

LC

C

2

0.2

6)

-

LC

C

7

3.2

7)

L

LC

C

900

93.0

7)

L

LC

C

7

3.2

8)

-

-

-

14

1.3

8)

-

-

-

0

0

Ā 

Total

966

99.9

Ā 

Total

216

100

Ā Ā 

Misregulation of genes observed in cli186 in:

Ā Ā 

c

Regulation of genes observed in WT in:

L (31)

C (36)

LC (91)

L_C (3)

L_LC (41)

LC_C (7)

L_LC_C (7)

WT Regulation (14)

Ā Ā 

(2)

L

-

-

-

-

-

-

-

2

Ā Ā 

(1)

C

-

1

-

-

-

-

-

-

Ā Ā 

(22)

LC

1

-

8

-

-

1

-

12

Ā Ā 

(21)

L_C

-

-

10

1

-

-

-

10

Ā Ā 

(4)

L_LC

-

2

-

-

-

-

-

2

Ā Ā 

(2)

LC_C

-

1

-

-

-

-

-

1

Ā Ā 

(900)

L_LC_C

30

28

66

1

41

6

5

723

Ā Ā 

(14)

Not regulated

-

4

7

1

-

-

2

-

Ā Ā 
  1. The L/C patterns of misregulation in cli186 that are perturbed in a L and C interaction are in bold.