From: Seeded Bayesian Networks: Constructing genetic networks from microarray data
Learned Network
Ideal (KEGG pathway)
Edge in network
Yes
No
TP = |EL| ⋂ |EI|
FN = |EI| - TP
FP = |EL| - TP
TN = [(|VI|•|VI - 1|)/2] - FN