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Table 4 Biomass composition

From: The genome-scale metabolic model iIN800 of Saccharomyces cerevisiae and its validation: a scaffold to query lipid metabolism

Metabolites

Amount (mmol/gDW)

Amino acids

Carbon-limited

Nitrogen-limited

L-Alanine

0.357

0.252

L-Arginine

0.136

0.098

L-Asparagine

0.172

0.153

L-Aspartate

0.172

0.153

L-Cysteine

0.043

0.044

L-Glutamate

0.268

0.231

L-Glutamine

0.268

0.231

Glycine

0.325

0.278

L-Histidine

0.075

0.071

L-Isoleucine

0.172

0.142

L-Leucine

0.250

0.207

L-Lysine

0.239

0.204

L-Methionine

0.050

0.044

L-Phenylalanine

0.114

0.092

L-Proline

0.129

0.118

L-Serine

0.254

0.225

L-Threonine

0.197

0.160

L-Tryptophan

0.027

0.028

L-Tyrosine

0.096

0.068

Carbohydrates

Carbon-limited

Nitrogen-limited

Glycogen

0.519

0.667

alpha,alpha-Trehalose

0.023

0.085

Mannan

0.821

0.994

1,3-beta-D-Glucan

1.136

0.963

RNA

Carbon-limited

Nitrogen-limited

AMP

0.051

0.040

GMP

0.051

0.040

CMP

0.050

0.039

UMP

0.067

0.052

DNA

Carbon-limited

Nitrogen-limited

dAMP

0.004

0.004

dCMP

0.002

0.003

dTMP

0.004

0.004

dGMP

0.002

0.003

Lipids

Carbon-limited

Nitrogen-limited

Phosphatidylcholine

0.002884

0.001660

1-Phosphatidyl-D-myo-inositol

0.001531

0.001656

Phosphatidylserine

0.000373

0.000302

Phosphatidylethanolamine

0.000697

0.000083

Acyl_acids

0.000206

0.000723

Triacylglycerol

0.000781

0.003618

Ergosterol-ester

0.000812

0.004632

Ergosta-5,7,22,24(28)-tetraenol

0.000125

0.000167

Ergosterol

0.005603

0.005155

Zymosterol

0.000015

0.000051

Episterol

0.000096

0.000062

Fecosterol

0.000114

0.000068

Lanosterol

0.000032

0.000074

4,4-Dimethylzymosterol

0.000056

0.000046

Ceramide-I

0.000351

0.000075

Ceramide-II

0.000066

0.000009