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Figure 7 | BMC Systems Biology

Figure 7

From: ALC: automated reduction of rule-based models

Figure 7

Model definition for the example system. Default values are assigned for all initial conditions and parameters that are not given. These default values can be freely chosen. Note that xxb and x > 0 hold for the initial conditions of the example system when using the standard default values (see ALC user guide). When running the C MEX, MATLAB and Mathematica models, the simulation results for R[L, X] and RXE are visualized as they are defined as outputs. RXp, x and xb are also visualized as this is automatically done for all variables that are defined in the section #layer connections.

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