Skip to main content

Table 3 Jaccard coefficients between our results and experimental, computational, or parasitic results in each minor classification and in whole pathway maps.

From: An evaluation of minimal cellular functions to sustain a bacterial cell

Classification

Experiment

Computation

Parasite

 

E. coli

B. subtilis

E. coli

B. subtilis

B. aphidicola

Carbohydrate

0.63

0.50

0.67

0.50

0.55

Energy

0.33

0.00

0.20

0.33

0.40

Lipid

0.40

0.75

0.50

0.25

0.25

Nucleotide

1.00

1.00

1.00

1.00

1.00

Amino Acid

0.73

0.73

0.83

0.67

0.79

Other Amino Acids

0.25

0.00

0.38

0.33

0.60

Glycan

0.50

1.00

1.00

0.00

0.50

Cofactors and Vitamins

0.71

0.33

0.38

0.25

0.67

Secondary Metabolites

0.00

0.00

0.00

0.00

0.00

All

0.61

0.53

0.60

0.45

0.59