Figure 2

Conversion of gene expression data into induced/repressed binary vectors. Based on defined cut-offs, we determine whether each gene is induced or repressed or non-regulated in each condition. Next, we derived for each gene two vectors: induced and repressed state binary vectors. In the induced state binary vector, we assigned one to all experiments where the gene was induced, and otherwise zero. In the repressed state binary vector, we assigned one to all experiments where the gene was repressed, and otherwise zero.