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Table 1 Model parameters and their abbreviations.

From: Elongation, proliferation & migration differentiate endothelial cell phenotypes and determine capillary sprouting

Variable

Abbreviation

Concentration of A (ng/ml)

[A]

Hypoxia inducible factor (HIF1α)

Hα

Vascular endothelial growth factor

VEGF

Matrix metalloproteinase

MMP

Notch ligand Delta-like 4

Dll4

Gradient (concentration of species A) (ng/ml/μm)

∇A

Standard deviation

σ

Probability distribution

Ï•

Cell position

X(i,j,k)

Velocity (μm/s)

ν(i,j,k)

Directional vector

d

Persistence

p

Degree of randomness

μ

Length (μm)

â„“

Time (hr)

t

Elongation constant

ε

Total tip cell movement

mtotal

Migration of the tip cell (μm)

Mtip

Elongation of the tip cell (μm)

Etip

Elongation of the adjacent stalk cell segment (μm)

Estalk

Proliferation of tip cell (% volume increase)

Ptip

Proliferation of stalk cell (% volume increase)

Pstalk

Cell volume (μm3)

V

Total stalk cell volume in a sprout (μm3)

VsproutStalk

Radius of cell (μm)

R

Radius after proliferation (μm)

RP

Outer radius of existing capillary (μm)

Rcap

Radius of inner lumen in existing capillary (μm)

rlumen

Length of tip cell (μm)

â„“tip

Length of adjacent stalk cell segment (μm)

â„“Stalk

Length due to stalk cell growth (μm)

â„“ P stalk MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGaeS4eHW2aaSbaaSqaaiabbcfaqnaaBaaameaacqqGZbWCcqqG0baDcqqGHbqycqqGSbaBcqqGRbWAaeqaaaWcbeaaaaa@3572@

Length due to tip cell growth (μm)

â„“ P tip MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGaeS4eHW2aaSbaaSqaaiabbcfaqnaaBaaameaacqqG0baDcqqGPbqAcqqGWbaCaeqaaaWcbeaaaaa@32C0@

Length due to stalk cell stretching (μm)

â„“ E stalk MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGaeS4eHW2aaSbaaSqaaiabbweafnaaBaaameaacqqGZbWCcqqG0baDcqqGHbqycqqGSbaBcqqGRbWAaeqaaaWcbeaaaaa@355C@

Random number generator

rgen

Grid height (μm)

gH

Grid width (μm)

gW

Grid length (μm)

gl