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Table 2 Affected genes sorted by MIPS categories

From: Global transcriptional response of Saccharomyces cerevisiae to the deletion of SDH3

MIPS functional category

Number of genes

MIPS functional category

Number of genes

Unclassified proteins

124 (26, 98)

DNA processing

15 (4, 11)

RNA synthesis

41 (7, 34)

Protein degradation

15 (4, 11)

Transport routes

41 (11, 30)

Ribosome biogenesis

15 (7, 8)

Cell cycle

27 (4, 23)

Nucleotide metabolism

14 (4, 10)

C-compound and carbohydrate metabolism

25 (10, 15)

Protein targeting, sorting and translocation

13 (1, 12)

RNA processing

25 (3, 22)

Cell growth/Morphogenesis

12 (3, 9)

Fungal/microrganismic cell type differentiation

23 (2, 21)

Respiration

12 (1, 11)

Cellular sensing and response

20 (1, 19)

Lipid, fatty acid and isoprenoid metabolism

11 (4, 7)

Transported compounds (substrates)

17 (8, 9)

Stress response

11 (3, 8)

Protein modification

16 (7, 9)

Detoxification

9 (4, 5)

Mitochondrion

9 (4, 5)

Ionic homeostasis

9 (3, 6)

  1. Distribution of genes with significantly changed expression levels in the SDH3 deletion mutant classified in different functional categories as defined by the MIPS database. Number in parentheses show up and down regulated genes, respectively.