From: Protein-protein interaction as a predictor of subcellular location
PPI sets | Human | Mouse | Fly | Yeast | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
 | Total PPI (#) | Co-PPI (#) | Co-PPI (%) | Total PPI (#) | Co-PPI (#) | Co-PPI (%) | Total PPI (#) | Co-PPI (#) | Co-PPI (%) | Total PPI (#) | Co-PPI (#) | Co-PPI (%) |
Reference sets | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Known locations | 3298 | 2115 | 64% | 740 | 512 | 69% | 540 | 310 | 57% | 16110 | 9693 | 60% |
Randomized locations | 3298 | 1045 | 32% | 740 | 268 | 36% | 540 | 220 | 41% | 16110 | 6118 | 38% |
Subsets | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
BPscore | 366 (11%) | 308 | 84% | 79 (11%) | 68 | 86% | 65 (12%) | 63 | 97% | 3387 (21%) | 3177 | 94% |
DDI | 512 (16%) | 368 | 72% | 158 (21%) | 130 | 82% | 49 (9%) | 46 | 94% | 806 (5%) | 671 | 83% |
Interologs | 134 (4%) | 114 | 85% | 73 (10%) | 56 | 77% | 22 (4%) | 20 | 91% | 256 (2%) | 234 | 91% |
DB | 581 (18%) | 426 | 73% | 105 (14%) | 82 | 78% | 264 (49%) | 123 | 47% | 9579 (59%) | 5943 | 62% |
Method | 378 (15%) | 280 | 74% | 110 (16%) | 75 | 68% | 27 (5%) | 24 | 89% | 2879 (20%) | 2329 | 81% |
PMID | 281 (9%) | 213 | 76% | 56 (8%) | 46 | 82% | 23 (4%) | 21 | 91% | 1706 (11%) | 1462 | 86% |
Union of subsets | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Biological evidence type (BIO) | 838 (25%) | 642 | 77% | 253 (34%) | 207 | 82% | 101 (19%) | 94 | 93% | 3825 (24%) | 3508 | 92% |
Recorded evidence type (EVI) | 793 (23%) | 583 | 74% | 216 (30%) | 161 | 75% | 295 (54%) | 149 | 51% | 9733 (60%) | 6087 | 63% |