Table 4 Predicted genes for Cluster A and B form the "no evidence" group
From: A dynamic network of transcription in LPS-treated human subjects
Cluster | Category | Gene Symbol | Gene Name |
|---|---|---|---|
A | Top 10 | ETS2 | v-ets erythroblastosis virus E26 oncogene homolog 2 |
| Â | Â | MTF1 | metal-regulatory transcription factor 1 |
| Â | Â | SAMSN1 | SAM domain, SH3 domain and nuclear localization signals 1 |
| Â | Â | IVNS1ABP | influenza virus NS1A binding protein |
| Â | Â | IFNGR2 | interferon gamma receptor 2 |
| Â | Â | PLAUR | plasminogen activator, urokinase receptor |
| Â | Â | IL1R2 | interleukin 1 receptor, type II |
| Â | Â | AZIN1 | antizyme inhibitor 1 |
| Â | Â | EHD1 | EH-domain containing 1 |
| Â | Â | PCNX | pecanex homolog |
| Â | Related to innate immunity | IFNGR2 | interferon gamma receptor 2 |
| Â | Â | IL1R2 | interleukin 1 receptor, type II |
| Â | Â | MAP4K4 | mitogen-activated protein kinase kinase kinase kinase 4 |
| Â | Â | NCF1 | neutrophil cytosolic factor 1 |
| Â | Â | TXN | thioredoxin |
| Â | Â | RIPK2 | receptor-interacting serine-threonine kinase 2 |
| Â | Supported by other evidence | IFNGR2* | interferon gamma receptor 2 |
| Â | Â | GPR84** | G protein-coupled receptor 84 |
| Â | Â | FCAR** | Fc fragment of IgA, receptor for |
| Â | Â | GADD45B** | growth arrest and DNA-damage-inducible, beta |
B | Top 10 | TRIM5 | tripartite motif-containing 5 |
| Â | Â | GK | glycerol kinase |
| Â | Â | SP110 | SP110 nuclear body protein |
| Â | Â | TMEM140 | transmembrane protein 140 |
| Â | Â | CHMP5 | chromatin modifying protein 5 |
| Â | Â | RHBDF2 | rhomboid 5 homolog 2 |
| Â | Â | SAMD9 | sterile alpha motif domain containing 9 |
| Â | Â | DDX58 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 |
| Â | Â | TLE3 | transducin-like enhancer of split 3 |
| Â | Â | TRIM21 | tripartite motif-containing 21 |
| Â | Related to innate immunity | CSF2RB | colony stimulating factor 2 receptor, beta, low-affinity |
| Â | Â | HCK | hemopoietic cell kinase |
| Â | Â | IL13RA1 | interleukin 13 receptor, alpha 1 |
| Â | Â | TLR1 | toll-like receptor 1 |
| Â | Â | TNFRSF1A | tumor necrosis factor receptor superfamily, member 1A |
| Â | Supported by other evidence | DDX5*** | DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 |
| Â | Â | HERC5*** | hect domain and RLD 5 |
| Â | Â | IFIT2*** | interferon-induced protein with tetratricopeptide repeats 2 |
| Â | Â | OASL*** | 2'-5'-oligoadenylate synthetase-like |
| Â | Â | SNX10*** | sorting nexin 10 |
| Â | Â | ACSL4*** | acyl-CoA synthetase long-chain family member 4 |