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Table 4 GO Enrichment of clusters found in the 0.3 co-expression network

From: Large-scale analysis of Arabidopsis transcription reveals a basal co-regulation network

Network tscore threshold Cluster ID Cluster Size Enriched GO Terms Percent of Genes with Enriched GO Terms
0.3 1 126 ribosome 91.26%
  2 150 chloroplast; photosynthesis; structural constituent of ribosome 73.33%; 23.33%; 8.66%
  3 143 plastid; ribosome 48.25%; 13.98%
  4 34 None None
  5 34 nucleotide binding 32.35%
  6 39 ribonucleoprotein complex; protein targeting to mitochondrion 51.28%; 10.25%
  7 14 None None
  8 118 plastid; organelle lumen 48.3%; 9.32%
  9 101 plastid 32.67%
  10 68 plastid 45.58%
  11 39 glycoside biosynthesis 10.25%
  12 27 None None
  13 83 plastid; plastid organization and biogenesis 63.85%; 6.02%
  14 82 plastid; mitocohndrion; response to stress; ER; response to temperature stimulus 32.92%; 17.07%; 14.63%; 13.41%; 8.53%
  15 9 None None
  16 32 None None
  17 78 plastid; isoprenoid biosynthesis; carotenoid biosynthesis 44.87%; 7.69%; 5.12%
  18 8 phenylpropanoid metabolic process; flavonoid biosynthesis; response to UV 75%; 62.5%; 50%
  19 7 proteasome core complex 100%
  20 10 None None
  21 9 response to stress; defense response 55.55%; 44.44%
  22 30 plastid 66.66%
  23 11 None None
  24 8 None None
  25 28 plastid; cellular carbohydrate metabolism 39.28%; 21.42%
  26 9 None None
  27 6 DNA metabolic process; nucleosome assembly 100%; 83.33%
  28 6 None None
  29 8 None None
  30 7 mitochondrion 71.42%
  31 6 ATP Binding; response to heat 66.66%; 66.66%
  32 5 None None
  33 15 response to heat 46.66%
  34 6 None None
  35 4 None None
  36 4 None None
  37 4 None None
  38 4 structural constituent of cell wall 100%