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Table 1 Table 1:

From: Snazer: the simulations and networks analyzer

Xml-incapsulation routine benchmarks
Name BWB XML (compression %) Allocated memory
CC(1) 55.619 7.974 (85.66%) 398.248
UAT(1) 68.276 20.486 (70.00%) 403.136
CC(2) 102.870 19.875 (80.68%) 503.344
UAT(2) 106.271 21.100 (80.15%) 480.448
MAPKc 577.962 50.618 (91.24%) 1.721.616
Bycc(1) 909.064 172.266 (81.05%) 2.038.944
Gpc-RS 8.293.036 190.131 (97.71%) 21.790.768
Bycc(2) 130.821.452 3.735.872 (97.14%) 241.635.920
Bycc(3) 136.219.582 3.913.680 (97.13%) 191.823.072
Bycc(4) 148.322.373 4.318.744 (97.09%) 192.881.840
  1. Data set names have been shortened in: CC (Circadian Clock) [59], UAT (Unpacked antagonistic toggle switch in budding yeast cell cycle) [62], MAPKc (MAPK cascade), Gpc-RS (G-protein-coupled receptor signaling) [63] and Bycc (Budding yeast cell cycle) [64]. Measurements are expressed in KByte. We list the names of the models in the first column. The second one identifies the traces files size generated by BWB. The third one holds the sizes of the corresponding compressed XML files (in percentage). The last one lists the quantity of memory allocated (in KBytes) for the compression and conversion routines from BWB to XML formats.