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Table 3 The top-100 metagene pairs* common to at least two conserved co-expression networks

From: A yeast's eye view of mammalian reproduction: cross-species gene co-expression in meiotic prophase

Top-100 metagene pairs

Y-M m

Y-M f

Y-H f

Y-M m -M f -H f

DED1-RTS2

+

+

+

+

CDC28-CUP5

+

+

+

+

NIF3-RIM15

+

+

+

+

RRI1-TID3

+

+

+

 

PUT1-YOR289W

+

+

+

 

CDC33-UNG1

+

+

+

 

DUS3-MDJ1

+

+

+

 

BRF1-LSC2

+

+

+

 

BUD32-FET5

+

 

+

+

MSH5-SCC2

+

 

+

+

GET3-SRP102

 

+

+

+

DOC1-MSH4

+

+

  

MSH4-MSH5

+

+

  

PRE1-SMC6

+

+

  

MLP1-YFR018C

+

+

  

GOR1-YPL225W

+

+

  

AGX1-YMR074C

+

 

+

 

PYC1-SSU72

+

 

+

 

MCM2-RRN3

 

+

+

 

CCT5-YKE2

+

  

+

COG3-CYB5

+

  

+

COG6-HOP1

+

  

+

DPP1-KAP114

+

  

+

NAM8-STE24

+

  

+

PTC3-YEF1

+

  

+

RPL32-RPL37A

+

  

+

CDC50-RRP1

+

  

+

PUF6-RVB1

+

  

+

PNG1-SPT15

+

  

+

MTC5-TLG1

+

  

+

ASC1-RPP2B

 

+

 

+

APT1-ATP16

 

+

 

+

DIA4-SRP72

 

+

 

+

GOS1-RIM11

 

+

 

+

FOX2-HRD1

 

+

 

+

HRD1-RPN1

 

+

 

+

IFM1-MTO1

 

+

 

+

KAR3-RPN7

 

+

 

+

FMP32-LSM12

 

+

 

+

NFU1-RBG1

 

+

 

+

RPA135-VPS15

 

+

 

+

BZZ1-PRP16

  

+

+

DMC1-HOP1

  

+

+

IDH2-UTP4

  

+

+

MAK10-MAK5

  

+

+

CGI121-NIF3

  

+

+

CUL3-PCM1

  

+

+

QRI1-RPN2

  

+

+

RAD27-RPT6

  

+

+

RPN7-SDH2

  

+

+

POB3-SCP160

  

+

+

DDP1-SPB1

  

+

+

TLG1-TYW3

  

+

+

YBR241C-YNL155W

  

+

+

  1. * Top metagene pairs are the pairs with the most significant P-values for co-expression across species.