Skip to main content

Table 2 Selection order for regional metagenes in prediction of proliferation

From: Genomic distance entrained clustering and regression modelling highlights interacting genomic regions contributing to proliferation in breast cancer

RMG Chr Cytobands Position (Mb) Genes Correlation
1 8 8q13.1 - 8q22.3 66.72 - 104.15 21 0.52
2 8 8p22 - 8p12 17.55 - 31.15 19 -0.41
3 11 11q13.1 - 11q13.4 66.01 - 70.89 11 0.38
4 7 7p15.2 - 7p15.2 27.15 - 27.18 4 -0.39
5 3 3p21.31 - 3p14.3 49.13 - 58.5 9 -0.26
6 16 16p13.3 - 16p13.2 0.04 - 8.86 12 0.45
7 17 17p13.3 - 17p11.2 0.59 - 19.71 19 -0.11
8 22 22q11.22 - 22q11.22 20.88 - 21.57 5 -0.04
9 1 1q24.2 - 1q44 166.15 - 245 23 0.13
10 23 23q28 - 23q28 148.67 - 153.54 8 0.32
11 19 19q13.11 - 19q13.43 40.22 - 63.77 34 -0.13
12 3 3q13.32 - 3q22.1 120.41 - 132.22 8 0.30
13 1 1p13.3 - 1p13.3 110 - 110.09 4 -0.29
14 16 16p13.3 - 16p13.2 0.71 - 8.78 8 -0.07
15 16 16q13 - 16q22.3 55.32 - 73.24 16 0.40
16 22 22q12.2 - 22q13.33 28.46 - 49.31 20 0.22
17 23 23q22.1 - 23q22.2 99.77 - 102.52 6 -0.31
18 6 6q14.2 - 6q23.3 83.93 - 137.41 9 0.14
19 7 7q21.12 - 7q22.3 86.81 - 107.05 9 -0.16
20 20 20p11.21 - 20q13.33 25.18 - 62.13 18 0.09
21 7 7q34 - 7q34 142.14 - 142.18 4 0.11
22 17 17p11.2 - 17q21.32 19.38 - 43.11 15 0.10
23 11 11q14.1 - 11q25 85.05 - 133.6 13 -0.20
24 11 11q12.2 - 11q13.4 60.86 - 72.62 11 0.20
25 5 5q13.1 - 5q13.2 69.21 - 70.46 8 -0.11
26 8 8q24.3 - 8q24.3 141.6 - 146.25 19 0.47
27 11 11q22.3 - 11q24.3 109.61 - 129.59 11 -0.02
28 17 17q23.3 - 17q25.3 58.86 - 78.25 24 0.27
29 18 18q11.2 - 18q21.33 17.48 - 59.14 14 -0.11
30 17 17q21.31 - 17q24.1 38.06 - 59.92 17 0.16
31 22 22q12.3 - 22q13.1 34.37 - 37.81 10 0.08
32 12 12p13.31 - 12p13.2 6.42 - 10.48 10 0.06
33 17 17q11.2 - 17q21.31 23.39 - 39.99 19 0.08
34 17 17q22 - 17q24.2 53.3 - 64.04 9 0.16
35 17 17q12 - 17q21.1 33.04 - 35.61 8 0.27
36 19 19q13.42 - 19q13.42 59.41 - 59.84 4 0.21
37 6 6q25.1 - 6q25.1 151.77 - 152.46 4 -0.01
38 8 8p12 - 8p11.21 37.74 - 42.87 8 0.14
39 19 19p13.3 - 19p13.13 0.94 - 12.93 10 0.27
40 19 19q13.2 - 19q13.2 46.07 - 46.29 4 -0.06
41 14 14q32.33 - 14q32.33 105.4 - 106.35 4 -0.07
42 6 6p22.1 - 6p21.32 26.47 - 32.94 12 0.11
  1. The RMGs are numbered in selection order. The chromosome, cytobands, position, number of genes and the correlation to the proliferation metagene for the merged 793- sample dataset are shown.