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Table 1 Training set gene list

From: SVM classifier to predict genes important for self-renewal and pluripotency of mouse embryonic stem cells

MSMGs Non-MSMGs
Bmp4, Cdyl, Cdyl2, Dmrt1, Dppa4, Afp, Arid3a, Arid3b, Ascl1, Ascl2,
Dppa5a, Esrrb, Etv4, Etv5, Fgf4, Foxd3, Bat1a, Bmp2, Bmp5, Bmper, Ccnd2,
Foxh1, Gbx2, Grhl2, Jarid2, Klf2, Klf5, Cdh2, Cebpa, Cited1, Dach1, Dlx1,
Lefty2, Lin28, Mkrn1, Mycn, Nanog, Dlx4, Dlx6, Ednra, En1, Eomes, Ets2,
Nodal, Nr0b1, Nr5a2, Phc1, Phf17, Eya2, Fgf5, Foxb1, Gata1, Gata3,
Pou4f2, Pou5f1, Rif1, Sall1, Sall4, Sgk1, Gata4, Gata5, Gata6, Gfap, Gli3, Gsc,
Slc27a2, Socs3, Sox2, Spp1, Tcf15, Hand1, Hand2, Insm1, Isl1, Lbx1,
Tcfap2c, Tcfcp2l1, Tcl1, Tle4, Trp53, Lhx2, Lhx5, Lmx1a, Mbd2, Meis1,
Utf1, Zfp296, Zfp42 Mixl1, Myf5, Neurog1, Nfia, Npas3,
  Nr2f1, Nr2f2, Nrp1, Nrp2, Olig3, Otp,
  Otx1, Pax3, Pdx1, Peg3, Phox2b,
  Prl3d1, Prox1, Rybp, Shh, Sox1,
  Sox18, Sox3, Sox5, Sox9, Stra13, Syp,
  Tcf4
  1. List of genes used as training set include 46 positive examples labelled as MSMG class and 70 negative examples labelled as non-MSMG class. These genes are derived from expert curation.