Table 1 Characteristics of the P. carbinolicus and P. propionicus genome-scale metabolic models compared with those of the G. sulfurreducens and G. metallireducens models.
From: Constraint-based modeling analysis of the metabolism of two Pelobacter species
| P. carbinolicus | P. propionicus | G. sulfurreducens | G. metallireducens | |||||
|---|---|---|---|---|---|---|---|---|
| Total Genes | 3389 | 3831 | 3468 | 3532 | ||||
| Included Genes | 741 | (21.9%) | 661 | (17.3%) | 712 | (20.5%) | 747 | (21.1%) |
| Excluded Genes | 2648 | (78.1%) | 3170 | (82.7%) | 2756 | (79.5%) | 2785 | (78.9%) |
| Total Proteins | 625 | 532 | 573 | 623 | ||||
| Total Reactions | 708 | 650 | 650 | 697 | ||||
| Non-gene Reactions | 37 | (5.2%) | 46 | (7.1%) | 34 | (5.2%) | 30 | (4.3%) |
| Total Exchange Reactions | 69 | 53 | 58 | 61 | ||||
| Total Metabolites | 765 | 708 | 701 | 769 | ||||
| Extracellular Metabolites | 70 | (9.2%) | 52 | (7.3%) | 57 | (8.1%) | 60 | (7.8%) |