Skip to main content

Table 1 Characteristics of the P. carbinolicus and P. propionicus genome-scale metabolic models compared with those of the G. sulfurreducens and G. metallireducens models.

From: Constraint-based modeling analysis of the metabolism of two Pelobacter species

  P. carbinolicus P. propionicus G. sulfurreducens G. metallireducens
Total Genes 3389   3831   3468   3532  
   Included Genes 741 (21.9%) 661 (17.3%) 712 (20.5%) 747 (21.1%)
   Excluded Genes 2648 (78.1%) 3170 (82.7%) 2756 (79.5%) 2785 (78.9%)
Total Proteins 625   532   573   623  
Total Reactions 708   650   650   697  
   Non-gene Reactions 37 (5.2%) 46 (7.1%) 34 (5.2%) 30 (4.3%)
Total Exchange Reactions 69   53   58   61  
Total Metabolites 765   708   701   769  
   Extracellular Metabolites 70 (9.2%) 52 (7.3%) 57 (8.1%) 60 (7.8%)