From: Understanding protein evolutionary rate by integrating gene co-expression with protein interactions
Protein interaction datasets | n | Percent variance explained in dN | |||
---|---|---|---|---|---|
 |  | PPID(p) | PPID control for Log(abundance)(p) | ePPID (p) | ePPID control for Log(abundance) (p) |
Y2H-union | 793 | 0.110(3.52e-01) | 0.145(2.84e-01) | 0.659(2.22e-02) | 0.547(3.73e-02) |
Combined-AP/MS | 763 | 2.50(1.13e-05) | 0.906(8.52e-03) | 4.25(9.08e-09) | 0.999(5.73e-03) |
LC-multiple | 680 | 1.29(3.01e-03) | 1.17(4.72e-03) | 4.11(9.62e-08) | 1.70(6.59e-04) |
Updated-HC | 1,587 | 0.722(7.04e-04) | 0.547(3.19e-03) | 3.53(4.39e-14) | 1.32(4.60e-06) |
DIP-CORE | 968 | 0.308(8.42e-02) | 0.109(3.05e-01) | 1.27(4.44e-04) | 0.109(3.05e-01) |
DIP-FULL | 1,792 | 1.99(2.03e-09) | 0.996(2.32e-05) | 3.99(1.39e-17) | 1.36(7.21e-07) |