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Table 4 Carnitine shuttle example: scenarios

From: Set-base dynamical parameter estimation and model invalidation for biochemical reaction networks

Scenario Type

Options

prior knowledge

3-PAR

  

5-PAR

measurement density

DENSE

  

SPARSE

measurement error

ERR-1%

 

ERR-2%

ERR-4%

measured concentrations

ALL

NOT-X3

NOT-X4

NOT-X3-X4

  1. Summary of the measurement and knowledge options. Each parameter estimate scenario is obtained by selecting a value for each of the options.