A multilevel data integration resource for breast cancer study

BMC Systems Biology

Table 1 Number of genes associated with the listed types of molecular alteration

Genome		Cell line	Clinical
	Amplification	25	24
	Deletion	5	16
	Insertion	2	8
	Methylation/Acetylation	18	23
	Single Nucleotide Polymorphism	3	21
	Transition	14	39
	Translocation	3	1
	Transversion	16	47
Transcriptome
	Expression Level	88	2027
	Splice Variant	28	17
Proteome
	Activity	8	12
	Altered Interaction	16	3
	Altered Isoform Splice Variant	10	9
	Altered Localisation	9	31
	Amino Acid Change	6	31
	Deletion	0	2
	Expression Level	36	117
	Post Translational Modification	13	4
Genes affected by at least one molecular alteration		2238

ISSN: 1752-0509