Table 1 Number of genes associated with the listed types of molecular alteration
From: A multilevel data integration resource for breast cancer study
| Genome | Cell line | Clinical | |
|---|---|---|---|
| Amplification | 25 | 24 | |
| Deletion | 5 | 16 | |
| Insertion | 2 | 8 | |
| Methylation/Acetylation | 18 | 23 | |
| Single Nucleotide Polymorphism | 3 | 21 | |
| Transition | 14 | 39 | |
| Translocation | 3 | 1 | |
| Transversion | 16 | 47 | |
| Transcriptome | |||
| Expression Level | 88 | 2027 | |
| Splice Variant | 28 | 17 | |
| Proteome | |||
| Activity | 8 | 12 | |
| Altered Interaction | 16 | 3 | |
| Altered Isoform Splice Variant | 10 | 9 | |
| Altered Localisation | 9 | 31 | |
| Amino Acid Change | 6 | 31 | |
| Deletion | 0 | 2 | |
| Expression Level | 36 | 117 | |
| Post Translational Modification | 13 | 4 | |
| Genes affected by at least one molecular alteration | 2238 | ||