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Table 1 CT-PPI modules

From: Composite functional module inference: detecting cooperation between transcriptional regulation and protein interaction by mantel test

Type

GO ID

Description

R

Structure compactness

BP

GO:0015992

proton transport

0.6126

Y

BP

GO:0009108

coenzyme biosynthetic process

0.6085

Y

CC

GO:0016469

proton-transporting two-sector ATPase complex

0.5875

Y

BP

GO:0006752

group transfer coenzyme metabolic process

0.5702

Y

BP

GO:0009201

ribonucleoside triphosphate biosynthetic process

0.5263

Y

BP

GO:0009152

purine ribonucleotide biosynthetic process

0.4883

Y

CC

GO:0044455

mitochondrial membrane part

0.2404

Y

CC

GO:0005743

mitochondrial inner membrane

0.2392

Y

BP

GO:0006119

oxidative phosphorylation

0.2241

Y

BP

GO:0007131

meiotic recombination

0.5754

 

CC

GO:0030532

small nuclear ribonucleoprotein complex

0.5164

 

CC

GO:0005684

U2-dependent spliceosome

0.4455

 

CC

GO:0000790

nuclear chromatin

0.4196

 

CC

GO:0000794

condensed nuclear chromosome

0.3249

 

BP

GO:0045893

positive regulation of transcription, DNA-dependent

0.3082

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