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Table 3 Functions of CT-PPI modules

From: Composite functional module inference: detecting cooperation between transcriptional regulation and protein interaction by mantel test

Functional description

GOID

TFs regulated C-pairs of CT-PPI

Oxidative phosphorylation

GO:0015992,GO:0009108,GO:0016469

GO:0006752,GO:0009201,GO:0009152

GO:0044455,GO:0005743,GO:0006119

HAP4(21)

RNA splicing

GO:0005684,GO:0030532

STE12(2)

DIG1,PDR1,ABF1(1)

positive regulation of

transcription, DNA-dependent

GO:0045893

GAL4(2)

STE12,DIG1(1)

nuclear chromatin

GO:0000790

HIR2,HIR1(6)

SWI4(1)

meiotic recombination

GO:0007131

MBP1(4)

condensed nuclear chromosome

GO:0000794

MBP1(5)

SWI6(1)

  1. *the number in () represent the C-pairs of CT-PPI regulated by the TF.