Skip to main content

Table 3 Functions of CT-PPI modules

From: Composite functional module inference: detecting cooperation between transcriptional regulation and protein interaction by mantel test

Functional description GOID TFs regulated C-pairs of CT-PPI
Oxidative phosphorylation GO:0015992,GO:0009108,GO:0016469
GO:0006752,GO:0009201,GO:0009152
GO:0044455,GO:0005743,GO:0006119
HAP4(21)
RNA splicing GO:0005684,GO:0030532 STE12(2)
DIG1,PDR1,ABF1(1)
positive regulation of
transcription, DNA-dependent
GO:0045893 GAL4(2)
STE12,DIG1(1)
nuclear chromatin GO:0000790 HIR2,HIR1(6)
SWI4(1)
meiotic recombination GO:0007131 MBP1(4)
condensed nuclear chromosome GO:0000794 MBP1(5)
SWI6(1)
  1. *the number in () represent the C-pairs of CT-PPI regulated by the TF.