Table 4 Distributions of the predicted subcellular localizations for 12786 F. graminearum proteins based on ensemble classifier and BLAST.
From: FGsub: Fusarium graminearum protein subcellular localizations predicted from primary structures
Localization | Ensemble classifier | BLAST | Ensemble classifier+BLAST |
|---|---|---|---|
Extracellular | 3105 | 262 | 3163 |
Cytoplasm | 4782 | 2050 | 5699 |
ER | 4016 | 520 | 4166 |
Golgi apparatus | 1773 | 246 | 1975 |
Nucleus | 1381 | 1858 | 2868 |
Mitochondrion | 4115 | 952 | 4484 |
Peroxisome | 2202 | 154 | 2315 |
Endosome | 1075 | 52 | 1114 |
Vacuole | 3377 | 262 | 3505 |
Cell membrane | 5035 | 346 | 5130 |
Bud | Â | 11 | 11 |
Bud neck | Â | 36 | 36 |
Bud tip | Â | 6 | 6 |
Lipid-anchor | Â | 61 | 61 |
Centromere | Â | 23 | 23 |
Kinetochore | Â | 28 | 28 |
Telomere | Â | 19 | 19 |
cytoskeleton | Â | 88 | 88 |
Spindle | Â | 48 | 48 |
Prospore membrane | Â | 4 | 4 |
Peripheral membrane | Â | 280 | 280 |
Multi-pass membrane | Â | 968 | 968 |
Single-pass membrane | Â | 229 | 229 |
Preautophagosomal structure membrane | Â | 4 | 4 |
Total | 12532 | 4897 | 12786 |