From: Shrunken methodology to genome-wide SNPs selection and construction of SNPs networks
 |  | The Proposed Method | Park's Method | ||||
---|---|---|---|---|---|---|---|
Chromosome | Number of SNPs | Accuracy | Δ | Number of SNPs | Accuracy | Δ | Number of SNPs |
1 | 29226 | 0.5926 | 0.893 | 21 | 0.5667 | 0.876 | 88 |
2 | 30298 | 0.6019 | 0.919 | 20 | 0.5722 | 0.965 | 87 |
3 | 25648 | 0.6056 | 0.880 | 26 | 0.5611 | 0.860 | 132 |
4 | 22315 | 0.6204 | 0.918 | 11 | 0.5945 | 1.024 | 42 |
5 | 22746 | 0.5796 | 0.926 | 22 | 0.5611 | 0.900 | 82 |
6 | 24334 | 0.6093 | 1.003 | 3 | 0.5204 | 0.944 | 49 |
7 | 19740 | 0.5797 | 0.901 | 7 | 0.5685 | 0.980 | 39 |
8 | 21384 | 0.5834 | 0.931 | 6 | 0.5741 | 0.979 | 35 |
9 | 18122 | 0.5426 | 0.932 | 7 | 0.5148 | 0.908 | 61 |
10 | 18525 | 0.6074 | 0.930 | 9 | 0.5593 | 0.999 | 47 |
11 | 18074 | 0.6352 | 0.964 | 7 | 0.5944 | 0.942 | 52 |
12 | 18186 | 0.6074 | 0.893 | 17 | 0.5667 | 0.975 | 31 |
13 | 13077 | 0.5870 | 0.906 | 9 | 0.5053 | 0.919 | 23 |
14 | 11728 | 0.5574 | 0.901 | 8 | 0.5259 | 0.962 | 26 |
15 | 10813 | 0.6037 | 0.905 | 8 | 0.5556 | 0.917 | 40 |
16 | 10892 | 0.5778 | 0.936 | 8 | 0.5611 | 0.946 | 37 |
17 | 10730 | 0.5815 | 0.919 | 4 | 0.5037 | 0.961 | 31 |
18 | 11677 | 0.5704 | 0.921 | 5 | 0.5071 | 0.956 | 27 |
19 | 7749 | 0.6037 | 0.887 | 7 | 0.5463 | 0.950 | 13 |
20 | 9647 | 0.6111 | 0.864 | 12 | 0.5907 | 0.951 | 33 |
21 | 6070 | 0.5833 | 0.875 | 8 | 0.4945 | 0.911 | 8 |
22 | 6459 | 0.6056 | 0.901 | 5 | 0.5444 | 0.924 | 23 |
Average | 0.5930 | 0.914 | 10 | 0.5495 | 0.943 | 46 |