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Table 1 Features of the in silico metabolic model of R.eutropha H16

From: Genome-scale reconstruction and in silico analysis of the Ralstonia eutropha H16 for polyhydroxyalkanoate synthesis, lithoautotrophic growth, and 2-methyl citric acid production

Features Number
Genome feature  
Genome size (base pairs, bp) 7,416,678
Chromosome 1 4,052,032
Chromosome 2 2,912,490
Megaplasmid pHG1 452,156
No. of open reading frames (ORFs) 6,626 (1,678)a
Chromosome 1 3,651 (841)
Chromosome 2 2,555 (680)
Megaplasmid pHG1 420 (157)
In silico metabolic model  
No. of reactions (redundant) included in the model 1391
No. of biochemical reactions 1162
No. of transport reactions 229
No. of reactions (unique) included in the modelb 1367
No. of metabolites 1171
No. of ORFs assigned in metabolic network 1256
ORF coveragec (%) 18.96
  1. a The parenthesis contains the number of the ORFs with unknown function.
  2. bThe same redundant reactions catalyzed by an isozyme is counted as one.
  3. cThe number of ORFs incorporated in the genome-scale model divided by the total number of ORFs in the genome of R. eutropha.