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Table 2 Gene Ontology Enrichment of Transcripts Following Bifurcation

From: How yeast re-programmes its transcriptional profile in response to different nutrient impulses

  Branch of Down-regulated Transcripts Branch of Up-regulated Transcripts
Case Bifurcation Controlling TFs Process Gene Ontology Terms p-value Bifurcation Controlling TFs Process Gene Ontology Terms p-value
Carbon Catabolite Repression Mth1p, Msn2p, Msn4p, Hap2p, Swi4p, Ume6p ion trans-membrane transporter activity 5.3 × 10-5 Mth1p, Msn2p, Msn4p, Hap2p, Swi4p, Ume6p Endoplasmic reticulum membrane 4.7 × 10-5
   G1-specific transcription in mitotic cell cycle 5.0 × 10-3   Microtubule associated complex 2.8 × 10-3
   aerobic respiration 8.4 × 10-5   tRNA modification 1.0 × 10-3
   retrograde transport 8.1 × 10-3   Proteasome complex 1.3 × 10-3
Nitrogen Catabolite Repression Hms1p, Mga1p, Msn1p, Phd1p, Hap2p ion trans-membrane transport 5.9 × 10-3 Gcr2p ribosome biogenesis and assembly 2.9 × 10-3