From: Identifying cancer biomarkers by network-constrained support vector machines
SNR (db) | network-based method | gene-based method | |||||
---|---|---|---|---|---|---|---|
 | netSVM | F∞-norm SVM | Larsnet | Chuang's method | SVM | Lasso | T-test |
10 | 0.89 ± 0.00 | 0.80 ± 0.03 | 0.64 ± 0.02 | 0.85 ± 0.03 | 0.79 ± 0.00 | 0.62 ± 0.02 | 0.78 ± 0.03 |
8 | 0.90 ± 0.02 | 0.81 ± 0.03 | 0.64 ± 0.02 | 0.81 ± 0.03 | 0.79 ± 0.02 | 0.62 ± 0.01 | 0.78 ± 0.04 |
6 | 0.90 ± 0.02 | 0.81 ± 0.03 | 0.63 ± 0.02 | 0.84 ± 0.03 | 0.79 ± 0.03 | 0.62 ± 0.02 | 0.77 ± 0.04 |
4 | 0.90 ± 0.02 | 0.81 ± 0.04 | 0.63 ± 0.01 | 0.82 ± 0.02 | 0.80 ± 0.02 | 0.61 ± 0.01 | 0.78 ± 0.04 |
2 | 0.90 ± 0.02 | 0.80 ± 0.03 | 0.63 ± 0.01 | 0.83 ± 0.02 | 0.79 ± 0.02 | 0.62 ± 0.02 | 0.77 ± 0.04 |
0 | 0.90 ± 0.03 | 0.81 ± 0.03 | 0.63 ± 0.02 | 0.83 ± 0.04 | 0.79 ± 0.03 | 0.61 ± 0.02 | 0.78 ± 0.04 |
-2 | 0.91 ± 0.02 | 0.80 ± 0.03 | 0.63 ± 0.02 | 0.82 ± 0.03 | 0.80 ± 0.02 | 0.61 ± 0.02 | 0.79 ± 0.03 |
-4 | 0.89 ± 0.02 | 0.79 ± 0.03 | 0.63 ± 0.01 | 0.83 ± 0.02 | 0.78 ± 0.02 | 0.61 ± 0.02 | 0.78 ± 0.03 |
-6 | 0.88 ± 0.02 | 0.79 ± 0.03 | 0.63 ± 0.02 | 0.83 ± 0.04 | 0.75 ± 0.02 | 0.61 ± 0.01 | 0.76 ± 0.05 |
-8 | 0.89 ± 0.02 | 0.77 ± 0.03 | 0.63 ± 0.01 | 0.83 ± 0.03 | 0.75 ± 0.04 | 0.61 ± 0.01 | 0.77 ± 0.04 |
-10 | 0.87 ± 0.03 | 0.75 ± 0.03 | 0.63 ± 0.02 | 0.80 ± 0.04 | 0.74 ± 0.03 | 0.61 ± 0.01 | 0.76 ± 0.04 |