Figure 1

A summary of metabolic reaction additions and deletions to GEMs used in this study. In comparison to the previous E. coli K-12 MG1655 GEM (iAF1260), subsystem classification for new reaction additions to (A) iEco1339_MG1655. In addition, in comparison to iEco1339_MG1655, subsystem classification for reactions additions to (B) iEco1712_pan, or reaction deletions for (C) iEco1053_core, (D) reaction deletions shared in both EHEC strains (iEco1344_EDL933 and iEco1345_Sakai), (E) reaction deletions shared in both UPEC strains (iEco1288_CFT073 and iEco1301_UTI89), and (F) reaction deletions shared in both EHEC and EPEC strains.