Table 5 Carbon source utilization with respiration as FBA objective function.
| Â | E. coliK-12 | E. coliO157:H7 (EHEC)a | E. coli(UPEC)b | S. typhimurium | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Strain | MG1655 | W3110 | EDL933 | Sakai | CFT073 | UTI89 | LT2 | |||||||
Condition | O2 | No O2 | O2 | No O2 | O2 | No O2 | O2 | No O2 | O2 | No O2 | O2 | No O2 | O2 | No O2 |
Tested compounds included in models | 76 | 76 | 76 | 76 | 76 | 76 | 76 | 76 | 76 | 76 | 76 | 76 | 54 | 54 |
True positivec | 71 | 67 | 74 | 74 | 73 | 72 | 74 | 72 | 71 | 75 | 73 | 70 | 39 | 51 |
True negatived | 5 | 9 | 2 | 2 | 3 | 4 | 2 | 4 | 5 | 1 | 3 | 6 | 15 | 3 |
False positivee | 4 | 1 | 1 | 0 | 2 | 2 | 2 | 1 | 3 | 0 | 1 | 0 | 2 | 0 |
False negativef | 3 | 2 | 2 | 3 | 5 | 5 | 5 | 5 | 6 | 8 | 3 | 3 | 0 | 0 |