Table 6 Comparison of experimental and in silico net specific growth rates (h-1).
| Â | Aerobic | Anaerobic | ||||
|---|---|---|---|---|---|---|
|  | μexp | μ In silico a | μ In silicoII b | μexp | μ In silico a | μ In silicoII b |
E. coli MG1655 | 0.56 ± 0.03 | 0.74 ± 0.00 | 0.82 ± 0.05 | 0.39 ± 0.01 | 0.52 ± 0.00 | 0.19 ± 0.00 |
E. coli W3110 | 0.54 ± 0.01 | 0.74 ± 0.00 | 0.82 ± 0.00 | 0.33 ± 0.01 | 0.52 ± 0.00 | 0.19 ± 0.00 |
E. coli EDL933 | 0.79 ± 0.08 | 0.74 ± 0.00 | 0.63 ± 0.00 | 0.56 ± 0.04 | 0.53 ± 0.00 | 0.56 ± 0.01 |
E. coli Sakai | 0.80 ± 0.01 | 0.74 ± 0.00 | 0.63 ± 0.00 | 0.68 ± 0.01 | 0.53 ± 0.00 | 0.56 ± 0.00 |
E. coli CFT073 | 0.76 ± 0.01 | 0.71 ± 0.00 | 0.60 ± 0.00 | 0.40 ± 0.01 | 0.45 ± 0.00 | 0.42 ± 0.00 |
E. coli UTI89 | 0.55 ± 0.02 | 0.72 ± 0.01 | 0.61 ± 0.01 | 0.64 ± 0.01 | 0.45 ± 0.01 | 0.42 ± 0.01 |
E. coli core | - | 0.71 | 0.71 | - | 0.45 | 0.37 |
E. coli pangenome | - | 0.74 | 0.73 | - | 0.53 | 0.42 |
S. typhimurium LT2 | 0.86 ± 0.05 | 0.73 ± 0.00 | - | 0.54 ± 0.01 | 0.44 ± 0.00 | - |