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Table 1 The different models RNA interference models for the RNAi-induced mRNA degradation rate δ ( X s , X m ) and their corresponding parameters.

From: Modeling RNA interference in mammalian cells

Model 1

δ ( X m , X s ) = k 1 X s X m

k1: Rate of mRNA-siRNA* complex formation

Model 2

δ ( X m , X s ) = k 2 X s h 2 X m

k2: Rate of mRNA-siRNA* complex formation

h2: Number of siRNA target sites

Model 3

δ ( X m , X s ) = c 3 k 3 h 3 X s c 3 + k 3 h 3 X m X m

k3: Rate of mRNA-siRNA* complex formation

c3: Cleavage and dissociation rate of mRNA-siRNA*

h3: Number of siRNA target sites

Model 4

δ ( X m , X s ) = d 4 X s h 4 θ 4 h 4 + X s h 4 X m

d4: Maximal degradation rate of the mRNA due to RNAi

θ4: Michaelis-Menten like constant

h4: Number of siRNA target sites