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Table 3 Primer pairs for qPCR

From: More than just a metabolic regulator - elucidation and validation of new targets of PdhR in Escherichia coli

Binding site

Sequence 5'-3'

 

PdhRop

CACAGTTTCATGATTTC

+

 

GAGAGTGCCTTCGAG

-

GlcDop

CGGACCTCGTGCACAG

+

 

GTGCCATCAGTACCG

-

MraZop

AACGGTGATGACGATG

+

 

GGTAGGCACTGATAAG

-

MetBop

GTGTAATGCACCTGTC

+

 

AACCCGCTACGCACTG

-

YnfMop

ATGCAGCTCTTCCGC

+

 

TTCTCAGTGTCGCTTG

-

PtsGop

GTCGGTAAATCGCTGATGCTGCC

+

 

CAACAACTGCGGCCAGCGC

-