Skip to main content

Table 1 In vivo gene deletion data used evaluate and improve i VS941's predictive capabilities (Citations are indicated in square brackets).

From: Metabolic reconstruction of the archaeon methanogen Methanosarcina Acetivorans

  Substrate
Gene deletions acetate carbon monoxide methanol monomethylamine dimethylamine trimethylamine
ackR NGNG GNG[51] - - - -
ATP synthase NGNG[52] - GNG[52] - - -
DMTsD GG[53] GG[53] GG[53] - - GG[53]
mtsD+mtsF GG[53] GG[53] GG[53] - - GG[53]
mtsD+mtsH GG[53] GG[53] GG[53] - - GG[53]
mtsF GG[53] GG[53] GG[53] - - GG[53]
mtsH GG[53] GG[53] GG[53] - - GG[53]
mtsF+mtsH GG[53] GG[53] GG[53] - - GG[53]
lysK - - GG[54] - GG[54] GG[54]
lysS - - GG[54] GG[54] GG[54] GG[53]
MCR NGNG[43] GNG[43] NGNG[43] GNG[43] GNG[43] GNG[43]
mtaA1 - - NGNG[39]   - -
mtaA1 + MT1 GNG[39] - - - - -
mtaA2 - - GG[39] - - -
mtaCB1 - - GG[55] - - -
mtaCB1 + mtaCB2 - - GG[55] - - -
mtaCB1 + mtaCB2 + mtaCB3 - - GNG[55] - - -
mtaCB2 - - GG[55] - - -
mtaCB3 - - GG[55] - - -
mtbA - - - NGNG[39] NGNG[39] -
mtbA - - - - - GG[54]
ppylT GG[56] - GG[56] GNG[56] GNG[56] GNG[56]
ptaR NGNG GNG[51] - - - -
Rnf complex GNG[57] - - - - -
\