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Table 3 Comparison of Triple-Link with MCL and Affinity Propagation

From: TF-Cluster: A pipeline for identifying functionally coordinated transcription factors via network decomposition of the shared coexpression connectivity matrix (SCCM)

AGI

Cluster ID (TL)

Cluster ID (MCL)

Cluster ID (AP)

AT5G58010

1

14

28

AT5G19790

1

14

28

AT1G27740

1

14

28

AT5G25810

1

14

28

AT1G66470

1

14

118

AT2G28160

1

14

118

Cluster size

6

28 (Others not shown)

Size: Cluster 28: 5 TFs Cluster 118: 10 TFs

AT2G36400

7

15

140

AT3G01330

7

15

140

AT3G50870

7

15

140

AT4G37740

7

15

140

AT1G34355

7

15

143

AT4G23800

7

15

143

AT5G25475

7

15

143

AT2G22840

7

15

191

AT5G24330

7

15

191

Cluster size

9

14 (Others not shown)

Size: Cluster 140: 5 TFs Cluster 143: 8 TFs Cluster 191: 6 TFs