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Table 1 The best results found for q = 2.5 compared with q = 1.0.

From: Inference of gene regulatory networks from time series by Tsallis entropy

(a) ER network model

q

k

TP

FP

FN

TN

1

1

223

229

21

9735

2.5

 

229

105

15

9741

1

2

311

162

27

9635

2.5

 

320

50

18

9644

1

3

344

131

36

9584

2.5

 

362

17

18

9602

1

4

381

96

46

9527

2.5

 

397

15

30

9543

1

5

383

96

91

9435

2.5

 

401

11

73

9453

(b) BA network model

q

k

TP

FP

FN

TN

1

1

168

285

47

9738

2.5

 

175

149

40

9745

1

2

251

212

30

9689

2.5

 

259

83

22

9697

1

3

304

156

55

9586

2.5

 

314

37

45

9596

1

4

348

125

102

9448

2.5

 

356

21

94

9456

1

5

360

110

117

9406

2.5

 

383

16

94

9429

  1. The best results found for q = 2.5 compared with q = 1.0 by considering each gene individually in the same network: (a) uniformly-random Erdös-Rényi model (ER) and (b) scale-free Barabási-Albert network topology (BA).
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BMC Systems Biology

ISSN: 1752-0509

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