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Table 1 Integrated data for the Host-Pathogen interaction studies

From: BiologicalNetworks - tools enabling the integration of multi-scale data for the host-pathogen studies

 

Host

Pathogen

Host-Pathogen

Genome strains

-

22949

11843 (H)

Genome Sequences (complete genomes)

354

3994

-

Protein Sequences

99117

58218

-

cDNA library Sequences (+conditions, tissue sources)

79431

47175

-

Gene expression

12983

-

29

3D structures

135819

380

-

Protein- protein interactions/Reactions/Relations

> 200 000 000 in more than 1000 organisms

650

250

Phylogeny

9 phylogenetic tree libraries from PhyloFacts database [44]

Virulence

Statistics on confirmed Human cases of Influenza reported to WHO

Epidemiology

Infection occurrence, pathogen culture sites, dates, migration data vectors, movement data of infected individuals for 113 countries, 1605 locations