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Table 2 Comparison of BiologicalNetworks/HostPathogen database with public host-pathogen interaction resources

From: BiologicalNetworks - tools enabling the integration of multi-scale data for the host-pathogen studies

  PHI-base PHIDIAS NCBI Influenza db PIG IVDB Cytoscape BiologicalNetworks/HostPathogenDB
Scalability* no no no no no no yes
Data integration engine no no no no no no yes
Interaction and Pathways data/analysis yes yes no yes no yes yes
Chemicals/Drug Discovery no no no no no yes yes
3D structure no no no no no no yes
Sequence annotation/search no/yes yes/yes yes/yes no/yes no/no no/no yes/yes
Phylogenetic analysis no no yes no yes no yes
Regulatory regions analysis no no no no no no yes
Orthology analysis no no no no no no yes
Phylogeoraphy no no no no no no yes
Microarray data/analysis no/no yes/no yes/yes yes/no no/no yes/yes yes/yes
Web search/
Research environment
yes/no yes/no yes/no yes/no yes/no no/yes yes/yes
  1. *Scalability to the number of integrated data sources.