Table 3 Comparison with the BIOLOG substrates utilization assays
Class | Carbon source | BIOLOG results | In silico prediction | Agreement |
|---|---|---|---|---|
Carbohydrates | N-Acetyl-D-glucosamine | No Growth | No Growth | yes |
| Â | D-Galactose | Growth | Growth | yes |
|  | α-D-Glucose | Growth | Growth | yes |
| Â | m-Inositol | No Growth | No Growth | yes |
| Â | Sucrose | Growth | Growth | yes |
| Â | D-Trehalose | Growth | Growth | yes |
Carboxylic acids | Acetic acid | Growth | Growth | yes |
| Â | cis-Aconitic acid | Growth | Growth | yes |
| Â | Citric acid | Growth | Growth | yes |
| Â | D-Gluconic acid | Growth | Growth | yes |
|  | β-Hydroxybutyric acid | Growth | Growth | yes |
|  | α-Ketoglutaric acid | Growth | Growth | yes |
| Â | D,L-Lactic acid | Growth | Growth | yes |
| Â | Malonic acid | Growth | Growth | yes |
| Â | Propionic acid | No Growth | No Growth | yes |
| Â | Quinic acid | Growth | Growth | yes |
| Â | D-Saccharic acid | Growth | Growth | yes |
| Â | Succinic acid | Growth | Growth | yes |
Amino acids | L-Alanine | Growth | Growth | yes |
| Â | L-Asparagine | Growth | Growth | yes |
| Â | L-Aspartic acid | No Growth | Growth | no |
| Â | L-Glutamic acid | Growth | Growth | yes |
| Â | L-Histidine | Growth | Growth | yes |
| Â | Hydroxy-L-proline | Growth | Growth | yes |
| Â | L-Leucine | No Growth | Growth | no |
| Â | L-Ornithine | No Growth | Growth | no |
| Â | L-Phenylalanine | Growth | Growth | yes |
| Â | L-Proline | Growth | Growth | yes |
| Â | L-Pyroglutamic Acid | Growth | Growth | yes |
| Â | L-Serine | Growth | Growth | yes |
| Â | L-Threonine | No Growth | Growth | no |
| Â | D,L-Carnitine | No Growth | No Growth | yes |
|  | γ-Aminobutyric acid | Growth | Growth | yes |
Miscellaneous | Succinamic acid | Growth | Growth | yes |
| Â | Uridine | No Growth | No Growth | yes |
| Â | Thymidine | No Growth | No Growth | yes |
| Â | Putrescine | No Growth | No Growth | yes |
| Â | 2,3-Butanediol | No Growth | No Growth | yes |
| Â | Glycerol | No Growth | Growth | no |
| Â | D-Glucose-6-Phosphate | Growth | Growth | yes |