Regulatory link mapping between organisms

BMC Systems Biology

Table 3 TP, FP, FN and TN values for the mapped TGs in the target genome

	TGbl	TGbs	TGblbs	TGpr	TGgalf
Number of mapped TGs	2252	35181	2252	25259	25388
True Positives (TP)	1717	25180	1717	24973	25077
False Positives (FP)	535	10001	535	286	311
True Negatives (TN)	9625	159	9625	49	24
False Negatives (F)	23474	11	23474	218	114

Comparison of the five result sets of predicted target genes (TGs) determined for the A. thaliana genome based on binary classifier. TGpr and TGgalf are analyzed as the preferred sets for target gene mapping. E-value threshold used for BLAST is 1e-1

ISSN: 1752-0509