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Table 4 The predictive accuracy and MCC on the third level of EC hierarchy for AM-SVM and SVMHL.

From: Support vector machine prediction of enzyme function with conjoint triad feature and hierarchical context

Family name

AM-SVM

SVMHL

 

Accuracy(%)

MCC

Accuracy(%)

MCC

EC 1 : Oxidoreductases

96.2 ± 4.4

0.96 ± 3.2%

98.3 ± 4.6

0.98±2.4%

EC 2 : Transferases

89.2 ± 9.8

0.91 ± 10.1%

92.1±9.7

0.92±9.5%

EC 3 : Hydrolases

78.9 ± 5.2

0.81 ± 9.7%

81.7±4.9

0.81±8.9%

EC 4 : Lyases

95.6 ± 7.1

0.94 ± 3.4%

96.7±6.7

0.97±2.9%

EC 5 : Isomerase

78.8 ± 4.1

0.89 ± 3.1%

81.3±3.4

0.91±2.7%

EC 6 : Ligases

84.5 ± 7.1

0.87 ± 8.4%

86.4±6.4

0.91±8.7%