Table 3 WTCCC result: top 5 gene sets with smallest q-value associated with bipolar disorder phenotype from Z-statistic method
From: SNP-PRAGE: SNP-based parametric robust analysis of gene set enrichment
Gene set | No. genes | No. SNPs | p-value | q-value |
|---|---|---|---|---|
EICOSANOID_SYNTHESIS | 15 | 669 | 6.85 × 10-4 | 3.33 × 10-1 |
HSA04510_FOCAL ADHESION | 171 | 10281 | 2.50 × 10-3 | 1.00 |
HSA01030_GLYCAN_STRUCTURES _BIOSYNTHESIS_1 | 91 | 7475 | 4.01 × 10-3 | 1.00 |
BADPATHWAY | 17 | 1045 | 4.91 × 10-3 | 1.00 |
HSA05223_NON_SMALL_CELL_LUNG_CANCER | 43 | 2933 | 5.49 × 10-3 | 1.00 |