Table 4 WTCCC result: top 5 gene sets with smallest q-value associated with bipolar disorder phenotype from SNP-PRAGE
From: SNP-PRAGE: SNP-based parametric robust analysis of gene set enrichment
Gene set | No. genes | No. SNPs | p-value | q-value |
|---|---|---|---|---|
AGPCRPATHWAY | 12 | 616 | 5.2 × 10-5 | 1.45× 10-3 |
DREAMPATHWAY | 13 | 600 | 8.5× 10-5 | 1.45× 10-3 |
CK1PATHWAY | 16 | 1079 | 3.1× 10-4 | 3.52× 10-3 |
BIOGENIC_AMINE_SYNTHESIS | 16 | 914 | 1.0× 10-3 | 8.52× 10-3 |
BADPATHWAY | 21 | 1045 | 5.6× 10-3 | 1.51× 10-1 |