Table 2 Graph centrality based breast cancer signatures
From: Integration of breast cancer gene signatures based on graph centrality
BC | CC | DC | EC | IC | SC |
|---|---|---|---|---|---|
TP53 | TP53 | TP53 | TP53 | TP53 | TP53 |
EGFR | ESR1 | EGFR | ESR1 | EGFR | ESR1 |
CTNNB1 | AR | EP300 | EP300 | EP300 | EP300 |
SMAD3 | EGFR | ESR1 | AR | ESR1 | AR |
ESR1 | EP300 | BRCA1 | BRCA1 | BRCA1 | BRCA1 |
EP300 | SMAD3 | CREBBP | CREBBP | CREBBP | CREBBP |
SRC | BRCA1 | SMAD3 | SMAD3 | AR | SMAD3 |
BRCA1 | CTNNB1 | AR | EGFR | SMAD3 | EGFR |
CREBBP | SRC | CTNNB1 | HDAC1 | SRC | HDAC1 |
AR | CREBBP | SRC | STAT3 | CTNNB1 | STAT3 |
UBE2I | AKT1 | HDAC1 | RB1 | HDAC1 | RB1 |
DYNLL1 | HDAC1 | CASP3 | CTNNB1 | RB1 | CTNNB1 |
CASP3 | STAT3 | RB1 | JUN | PIK3R1 | JUN |
ACTB | STAT1 | PIK3R1 | SRC | CASP3 | SRC |
AKT1 | XRCC6 | STAT3 | AKT1 | STAT3 | AKT1 |
HDAC1 | RB1 | UBE2I | SMARCA4 | AKT1 | SMARCA4 |
PIK3R1 | PIK3R1 | AKT1 | CDKN1A | SHC1 | CDKN1A |
ZBTB16 | PML | CDK2 | PML | CDK2 | PML |
ACVR1 | UBE2I | PCNA | STAT1 | JUN | STAT1 |
RB1 | HSPA8 | SHC1 | CDK2 | STAT1 | CDK2 |
STAT1 | CASP3 | JUN | NCOA6 | UBE2I | NCOA6 |
HGS | CDK2 | DYNLL1 | HDAC2 | CDKN1A | HDAC2 |
CDK2 | SMARCA4 | STAT1 | PIK3R1 | PCNA | PIK3R1 |
YWHAZ | CDKN1A | ACTB | UBE2I | HDAC2 | UBE2I |
BCL2 | JUN | CDKN1A | XRCC6 | SMARCA4 | XRCC6 |
XRCC6 | CDH1 | MAPK14 | HIF1A | NFKB1 | HIF1A |
STAT3 | YWHAZ | YWHAZ | NFKB1 | CDH1 | NFKB1 |
PLK1 | MAPK14 | BCL2 | CASP3 | ACTB | CASP3 |
PCNA | PRKDC | HDAC2 | E2F1 | MAPK14 | E2F1 |
HSPA8 | HIF1A | ATM | CEBPB | LYN | CEBPB |
FN1 | SHC1 | LYN | PRKDC | XRCC6 | PRKDC |
VIM | STUB1 | NFKB1 | SHC1 | ATM | SHC1 |
CD44 | HDAC2 | XRCC6 | NCOA2 | ZBTB16 | NCOA2 |
MAPK14 | ERBB2 | CDH1 | CCND1 | E2F1 | CCND1 |
GNB2L1 | HSPA4 | SMARCA4 | PCNA | YWHAZ | PCNA |
FANCA | BCL2 | EZR | TDG | BCL2 | TDG |
EEF1A1 | ZBTB16 | HGS | ERBB2 | PML | ERBB2 |
SKIL | LYN | ZBTB16 | HSPA4 | JAK1 | HSPA4 |
SHC1 | NCOA6 | PLK1 | ZBTB16 | EZR | ZBTB16 |
USP7 | PAK1 | CAV1 | RXRA | PRKDC | RXRA |
CAV1 | MDM4 | E2F1 | MAPK14 | JAK2 | MAPK14 |
JUN | CASP8 | JAK1 | JAK2 | CASP8 | JAK2 |
RXRA | CEBPB | RXRA | STUB1 | RXRA | STUB1 |
LYN | NFKB1 | FN1 | CDK7 | ERBB2 | CDK7 |
CDKN1A | JAK2 | HSPA8 | PTPN6 | HIF1A | PTPN6 |
HIF1A | PTPN6 | VAV1 | ATM | CAV1 | ATM |
ATM | HGS | ACVR1 | BCL3 | HSPA8 | BCL3 |
EZR | EZR | CASP8 | DDX5 | VAV1 | DDX5 |
PPP1CA | CAV1 | HIF1A | RBL1 | CDKN2A | RBL1 |
PAK1 | PIAS4 | JAK2 | FOS | NCOA6 | FOS |
PLSCR1 | TDG | PML | CDH1 | PTPN6 | CDH1 |
TGFBR2 | IGF1R | CDKN2A | MDM4 | DYNLL1 | MDM4 |
AURKA | DDX5 | EEF1A1 | ING1 | HGS | ING1 |
KPNB1 | MET | ERBB2 | SIN3A | SIN3A | SIN3A |