Table 2 The cTBFSs mapped to the promoters of the 418 genes differentially expressed in ESCC
ERE Category | Â | C1+C3 | C1 | C2 | C3 | C4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Number of Genes | Â | 202 | 56 | 72 | 146 | 144 | |||||
| Â | Â | Genes | % | Genes | % | Genes | % | Genes | % | Genes | % |
cTFBS38 | V$AREB6_01|V$YY1_01|V$CETS1P54_01|V$E2A_Q6 | 17 | 8.42% | 8 | 14.29% | 9 | 12.50% | 9 | 6.16% | 0 | 0.00% |
cTFBS39 | V$AREB6_01|V$FREAC4_01|V$EBOX_Q6_01|V$E2A_Q6 | 16 | 7.92% | 11 | 19.64% | 7 | 9.72% | 5 | 3.42% | 0 | 0.00% |
cTFBS44 | V$TAXCREB_02|V$AREB6_01|V$CETS1P54_01|V$EBOX_Q6_01|V$CREB_Q3|V$E2A_Q6 | 16 | 7.92% | 9 | 16.07% | 7 | 9.72% | 7 | 4.79% | 0 | 0.00% |
cTFBS43 | V$TAXCREB_02|V$AREB6_01|V$EBOX_Q6_01|V$CREB_Q3|V$E2A_Q6 | 19 | 9.41% | 9 | 16.07% | 11 | 15.28% | 10 | 6.85% | 0 | 0.00% |
cTFBS17 | V$TAXCREB_02|V$FREAC4_01|V$E2A_Q6 | 18 | 8.91% | 10 | 17.86% | 8 | 11.11% | 8 | 5.48% | 0 | 0.00% |
cTFBS34 | V$TAXCREB_02|V$AREB6_01|V$CREB_Q3|V$E2A_Q6 | 22 | 10.89% | 10 | 17.86% | 14 | 19.44% | 12 | 8.22% | 0 | 0.00% |
cTFBS33 | V$TAXCREB_02|V$AREB6_01|V$ELK1_01|V$CREB_Q3 | 18 | 8.91% | 8 | 14.29% | 8 | 11.11% | 10 | 6.85% | 0 | 0.00% |
cTFBS41 | V$TAXCREB_02|V$AREB6_01|V$CETS1P54_01|V$CREB_Q3|V$E2A_Q6 | 17 | 8.42% | 9 | 16.07% | 9 | 12.50% | 8 | 5.48% | 0 | 0.00% |
cTFBS32 | V$TAXCREB_02|V$ELK1_01|V$EBOX_Q6_01|V$CREB_Q3 | 19 | 9.41% | 10 | 17.86% | 8 | 11.11% | 9 | 6.16% | 1 | 0.69% |
cTFBS23 | V$AREB6_01|V$ELK1_01|V$CREB_Q3 | 19 | 9.41% | 8 | 14.29% | 8 | 11.11% | 11 | 7.53% | 1 | 0.69% |
cTFBS35 | V$TAXCREB_02|V$AREB6_01|V$EBOX_Q6_01|V$CREB_Q3 | 21 | 10.40% | 11 | 19.64% | 11 | 15.28% | 10 | 6.85% | 1 | 0.69% |
cTFBS26 | V$AREB6_01|V$FREAC4_01|V$E2A_Q6 | 19 | 9.41% | 13 | 23.21% | 7 | 9.72% | 6 | 4.11% | 1 | 0.69% |
cTFBS37 | V$AREB6_01|V$CETS1P54_01|V$CREB_Q3|V$E2A_Q6 | 19 | 9.41% | 10 | 17.86% | 9 | 12.50% | 9 | 6.16% | 1 | 0.69% |
cTFBS16 | V$TAXCREB_02|V$FREAC4_01|V$CETS1P54_01 | 20 | 9.90% | 14 | 25.00% | 10 | 13.89% | 6 | 4.11% | 1 | 0.69% |
cTFBS36 | V$TAXCREB_02|V$EBOX_Q6_01|V$CREB_Q3|V$E2A_Q6 | 24 | 11.88% | 12 | 21.43% | 12 | 16.67% | 12 | 8.22% | 1 | 0.69% |
cTFBS42 | V$TAXCREB_02|V$AREB6_01|V$CETS1P54_01|V$EBOX_Q6_01|V$E2A_Q6 | 21 | 10.40% | 12 | 21.43% | 12 | 16.67% | 9 | 6.16% | 1 | 0.69% |
cTFBS22 | V$FREAC4_01|V$CETS1P54_01|V$EBOX_Q6_01 | 18 | 8.91% | 13 | 23.21% | 10 | 13.89% | 5 | 3.42% | 1 | 0.69% |
cTFBS40 | V$AREB6_01|V$EBOX_Q6_01|V$CREB_Q3|V$E2A_Q6 | 21 | 10.40% | 10 | 17.86% | 11 | 15.28% | 11 | 7.53% | 1 | 0.69% |
cTFBS21 | V$FREAC4_01|V$CETS1P54_01|V$E2A_Q6 | 18 | 8.91% | 12 | 21.43% | 7 | 9.72% | 6 | 4.11% | 1 | 0.69% |
cTFBS28 | V$AREB6_01|V$EBOX_Q6_01|V$CREB_Q3 | 23 | 11.39% | 12 | 21.43% | 11 | 15.28% | 11 | 7.53% | 2 | 1.39% |
cTFBS20 | V$TAXCREB_02|V$EBOX_Q6_01|V$CREB_Q3 | 27 | 13.37% | 14 | 25.00% | 13 | 18.06% | 13 | 8.90% | 2 | 1.39% |
cTFBS31 | V$TAXCREB_02|V$ELK1_01|V$CETS1P54_01|V$EBOX_Q6_01 | 23 | 11.39% | 14 | 25.00% | 16 | 22.22% | 9 | 6.16% | 2 | 1.39% |
cTFBS27 | V$AREB6_01|V$CREB_Q3|V$E2A_Q6 | 24 | 11.88% | 11 | 19.64% | 14 | 19.44% | 13 | 8.90% | 2 | 1.39% |
cTFBS8 | V$FREAC4_01|V$EBOX_Q6_01 | 22 | 10.89% | 15 | 26.79% | 13 | 18.06% | 7 | 4.79% | 3 | 2.08% |
cTFBS18 | V$TAXCREB_02|V$AREB6_01|V$CREB_Q3 | 27 | 13.37% | 12 | 21.43% | 17 | 23.61% | 15 | 10.27% | 3 | 2.08% |
cTFBS24 | V$AREB6_01|V$CETS1P54_01|V$CREB_Q3 | 24 | 11.88% | 11 | 19.64% | 9 | 12.50% | 13 | 8.90% | 3 | 2.08% |
cTFBS13 | V$TAXCREB_02|V$ELK1_01|V$CREB_Q3 | 28 | 13.86% | 12 | 21.43% | 11 | 15.28% | 16 | 10.96% | 3 | 2.08% |
cTFBS9 | V$AREB6_01|V$FREAC4_01 | 26 | 12.87% | 15 | 26.79% | 11 | 15.28% | 11 | 7.53% | 4 | 2.78% |
cTFBS19 | V$TAXCREB_02|V$CREB_Q3|V$E2A_Q6 | 30 | 14.85% | 14 | 25.00% | 15 | 20.83% | 16 | 10.96% | 4 | 2.78% |
cTFBS7 | V$FREAC4_01|V$E2A_Q6 | 25 | 12.38% | 14 | 25.00% | 9 | 12.50% | 11 | 7.53% | 4 | 2.78% |
cTFBS30 | V$EBOX_Q6_01|V$CREB_Q3|V$E2A_Q6 | 27 | 13.37% | 13 | 23.21% | 13 | 18.06% | 14 | 9.59% | 4 | 2.78% |
cTFBS1 | V$ELK1_01|V$CREB_Q3 | 32 | 15.84% | 12 | 21.43% | 11 | 15.28% | 20 | 13.70% | 5 | 3.47% |
cTFBS6 | V$FREAC4_01|V$CETS1P54_01 | 27 | 13.37% | 17 | 30.36% | 12 | 16.67% | 10 | 6.85% | 5 | 3.47% |
cTFBS15 | V$TAXCREB_02|V$CETS1P54_01|V$EBOX_Q6_01 | 34 | 16.83% | 18 | 32.14% | 21 | 29.17% | 16 | 10.96% | 5 | 3.47% |
cTFBS25 | V$AREB6_01|V$CETS1P54_01|V$E2A_Q6 | 30 | 14.85% | 16 | 28.57% | 16 | 22.22% | 14 | 9.59% | 5 | 3.47% |
cTFBS10 | V$AREB6_01|V$CREB_Q3 | 31 | 15.35% | 13 | 23.21% | 17 | 23.61% | 18 | 12.33% | 6 | 4.17% |
cTFBS14 | V$TAXCREB_02|V$CETS1P54_01|V$E2A_Q6 | 33 | 16.34% | 15 | 26.79% | 19 | 26.39% | 18 | 12.33% | 6 | 4.17% |
cTFBS12 | V$EBOX_Q6_01|V$CREB_Q3 | 32 | 15.84% | 16 | 28.57% | 15 | 20.83% | 16 | 10.96% | 7 | 4.86% |
cTFBS29 | V$AREB6_01|V$EBOX_Q6_01|V$E2A_Q6 | 38 | 18.81% | 16 | 28.57% | 21 | 29.17% | 22 | 15.07% | 8 | 5.56% |
cTFBS2 | V$ELK1_01|V$EBOX_Q6_01 | 36 | 17.82% | 17 | 30.36% | 18 | 25.00% | 19 | 13.01% | 9 | 6.25% |
cTFBS3 | V$CETS1P54_01|V$CREB_Q3 | 38 | 18.81% | 15 | 26.79% | 14 | 19.44% | 23 | 15.75% | 10 | 6.94% |
cTFBS4 | V$CETS1P54_01|V$EBOX_Q6_01 | 41 | 20.30% | 21 | 37.50% | 24 | 33.33% | 20 | 13.70% | 11 | 7.64% |
cTFBS5 | V$TAXCREB_02|V$CREB_Q3 | 43 | 21.29% | 18 | 32.14% | 23 | 31.94% | 25 | 17.12% | 12 | 8.33% |
cTFBS11 | V$AREB6_01|V$E2A_Q6 | 50 | 24.75% | 23 | 41.07% | 25 | 34.72% | 27 | 18.49% | 16 | 11.11% |