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Table 2 Knowledge analysis results

From: The extended TILAR approach: a novel tool for dynamic modeling of the transcription factor network regulating the adaption to in vitro cultivation of murine hepatocytes

Delta

# of

# prior-knowledge

Precision

RSS

 

edges

edges

  

1

56

5

0.0893

29.07801

0.75

54

12

0.2223

23.07626

0.5

47

27

0.5744

23.62479

0.25

49

25

0.5102

25.50705

0.1

64

47

0.7344

23.79333

0.05

81

60

0.7407

69.28333

0.01

119

77

0.6471

14233.39749

  1. Results of the knowledge analysis using 7 different delta values (Delta) showing the total number of inferred relations (# of edges) excluding the input-to-gene edges, the number of integrated prior-knowledge gene-to-TF relations (# prior-knowledge edges), their ratio (Precision) and the deviation of the simulated data to the measured ones (the RSS as defined in equation 5).