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Figure 6 | BMC Systems Biology

Figure 6

From: Analysis of alternative signaling pathways of endoderm induction of human embryonic stem cells identifies context specific differences

Figure 6

Robust subsets of co-regulated genes presented as a bipartite graph.. We have identified high Activin along with PI3K inhibition or activin in combination with WNT3A to work the best to co-regulate early endoderm marker CER and late endoderm markers HNF6. The Group 2 TFs HNF4Ī± and HNF6 are part of the network inducing NGN3 and PDX1, reminiscent of the pancreatic genotype and are favored by high activin with PI3KI and WNT3A.

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