Table 1 Characteristics of the reconstructed metabolic models iLC915 and iSS884 of Pichia pastoris and stipitis, in comparison with the S. cerevisiae model iIN800 and iMM904
Characteristics | P. stipitis | P. pastoris | S. cerevisiae | |||
|---|---|---|---|---|---|---|
| Â | iSS884 | iLC915 | PpaMBEL1254 | iPP668 | iMM904 | iIN800 |
Reactions | 1332 | 1423 | 1202 | 1354 | 1312 | 1446 |
   Cytoplasm | 824 | 790 | 604 | 623 | 635 | 906 |
   Mitochondria | 207 | 205 | 155 | 163 | 180 | 161 |
   Peroxisome | 60 | 64 | 66 | 66 | 63 |  |
   Vacuole |  | 12 | 6 | 3 | 3 |  |
   ER |  | 34 | 7 | 15 | 17 |  |
   Golgi |  | 4 | 8 | 4 | 2 |  |
   Nucleus |  |  | 17 | 16 | 18 |  |
   Extracellular |  |  | 11 | 12 | 7 |  |
Transport | 239 | 314 | 328 | 452 | 387 | 379 |
Metabolites | 920 | 899 | 1147 | 1177 | 1168 | 1013 |
Gene coverage (%) | 15.1 | 17.2 | 9.9 | 12.6 | 13.7 | 12.11 |
Coding genes | 5841 | 5313 | 5313 | 5313 | 6607 | 6607 |