Table 2 Pathway & interactome databases used to identify edges between genes
Database | Version/date | Type | Edges | Graph type |
|---|---|---|---|---|
i2D | 1.7.1 | PPIN | 11,327 | Undirected |
STRING | 8.2.1 | Text mining | 35,033 | Mixture |
GeneGo | 01.2010 | Curated | 11,994 | Mixture |
Cell Map | 01.2010 | Curated | 12,933 | Mixture |
NCI-PID | 01.2010 | Curated | 14,58 | Mixture |
Reactome | v35 | Curated | 6,930 | Mixture |
Macrophage curated | 2010 | Curated | 504 | Mixture |
SUMMARY | 64,276 | Mixture |