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Table 5 False negative model predictions caused by incorrect core biomass composition

From: Gap-filling analysis of the iJO1366 Escherichia coli metabolic network reconstruction for discovery of metabolic functions

Gene

Biomass component

mog (b0009)

bmocogdp[c]

moaA (b0781)

bmocogdp[c]

moaC (b0783)

bmocogdp[c]

moaD (b0784)

bmocogdp[c]

moaE (b0785)

bmocogdp[c]

moeA (b0826)

bmocogdp[c]

moeB (b0827)

bmocogdp[c]

ubiX (b2311)

2ohph[c]

iscS (b2530)

bmocogdp[c]

cysG (b3368)

sheme[c]

mobA (b3857)

bmocogdp[c]

ubiC (b4039)

2ohph[c]